<?xml version="1.0" encoding="UTF-8"?>
<!DOCTYPE article PUBLIC "-//NLM//DTD Journal Publishing DTD v3.0 20080202//EN" "http://dtd.nlm.nih.gov/publishing/3.0/journalpublishing3.dtd">
<article xmlns:mml="http://www.w3.org/1998/Math/MathML" xmlns:xlink="http://www.w3.org/1999/xlink" article-type="research-article" dtd-version="3.0" xml:lang="en">
<front>
<journal-meta>
<journal-id journal-id-type="publisher">GMDD</journal-id>
<journal-title-group>
<journal-title>Geoscientific Model Development Discussions</journal-title>
<abbrev-journal-title abbrev-type="publisher">GMDD</abbrev-journal-title>
</journal-title-group>
<issn pub-type="epub">1991-962X</issn>
<publisher><publisher-name>Copernicus GmbH</publisher-name>
<publisher-loc>Göttingen, Germany</publisher-loc>
</publisher>
</journal-meta>
<article-meta>
<article-id pub-id-type="doi">10.5194/gmdd-3-2189-2010</article-id>
<title-group>
<article-title>A quasi chemistry-transport model mode for EMAC</article-title>
</title-group>
<contrib-group><contrib contrib-type="author" xlink:type="simple"><name name-style="western"><surname>Deckert</surname>
<given-names>R.</given-names>
</name>
<xref ref-type="aff" rid="aff1">
<sup>1</sup>
</xref>
</contrib>
<contrib contrib-type="author" xlink:type="simple"><name name-style="western"><surname>Jöckel</surname>
<given-names>P.</given-names>
</name>
<xref ref-type="aff" rid="aff1">
<sup>1</sup>
</xref>
</contrib>
<contrib contrib-type="author" xlink:type="simple"><name name-style="western"><surname>Grewe</surname>
<given-names>V.</given-names>
</name>
<xref ref-type="aff" rid="aff1">
<sup>1</sup>
</xref>
</contrib>
<contrib contrib-type="author" xlink:type="simple"><name name-style="western"><surname>Gottschaldt</surname>
<given-names>K.-D.</given-names>
</name>
<xref ref-type="aff" rid="aff1">
<sup>1</sup>
</xref>
</contrib>
<contrib contrib-type="author" xlink:type="simple"><name name-style="western"><surname>Hoor</surname>
<given-names>P.</given-names>
</name>
<xref ref-type="aff" rid="aff2">
<sup>2</sup>
</xref>
</contrib>
</contrib-group><aff id="aff1">
<label>1</label>
<addr-line>Deutsches Zentrum für Luft- und Raumfahrt, Institut für Physik der Atmosphäre, Oberpfaffenhofen, Germany</addr-line>
</aff>
<aff id="aff2">
<label>2</label>
<addr-line>Johannes Gutenberg-Universität Mainz, Institut für Physik der Atmosphäre, Mainz, Germany</addr-line>
</aff>
<pub-date pub-type="epub">
<day>19</day>
<month>11</month>
<year>2010</year>
</pub-date>
<volume>3</volume>
<issue>4</issue>
<fpage>2189</fpage>
<lpage>2220</lpage>
<permissions>
<license xlink:type="simple">
<license-p>This is an open-access article ditributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.</license-p>
</license>
</permissions>
<self-uri xlink:href="http://www.geosci-model-dev-discuss.net/3/2189/2010/gmdd-3-2189-2010.html">This article is available from http://www.geosci-model-dev-discuss.net/3/2189/2010/gmdd-3-2189-2010.html</self-uri>
<self-uri xlink:href="http://www.geosci-model-dev-discuss.net/3/2189/2010/gmdd-3-2189-2010.pdf">The full text article is available as a PDF file from http://www.geosci-model-dev-discuss.net/3/2189/2010/gmdd-3-2189-2010.pdf</self-uri>
<abstract>
<p>A quasi chemistry-transport model mode (QCTM) is presented for the numerical
chemistry-climate simulation system ECHAM/MESSy Atmospheric Chemistry (EMAC).
It allows for a quantification of chemical signals through suppression of any
feedback between chemistry and dynamics. Noise would otherwise interfere too
strongly. The signal follows from the difference of two QCTM simulations,
reference and sensitivity. These are fed with offline chemical fields as a
substitute of the feedbacks between chemistry and dynamics: offline mixing
ratios of radiatively active substances enter the radiation scheme (a),
offline mixing ratios of nitric acid enter the scheme for re-partitioning and
sedimentation from polar stratospheric clouds (b). Offline methane oxidation
is the exclusive source of chemical water-vapor tendencies (c). Any set of
offline fields suffices to suppress the feedbacks, though may be inconsistent
with the simulation setup. An adequate set of offline climatologies can be
produced from a non-QCTM simulation of the reference setup. Test
simulations reveal the particular importance of adequate offline fields
associated with (a). Inconsistencies from (b) are negligible when using
adequate fields of nitric acid. Acceptably small inconsistencies come from
(c), but should vanish for an adequate prescription of water vapor
tendencies. Toggling between QCTM and non-QCTM is done via namelist switches
and does not require a source code re-compilation.</p>
</abstract>
<counts><page-count count="32"/></counts>
</article-meta>
</front>
<body/>
<back>
<ref-list>
<title>References</title>
<ref id="ref1">
<label>1</label><mixed-citation publication-type="other" xlink:type="simple"> Buchholz, J.: Simulations of physics and chemistry of polar stratospheric clouds with a general circulation model, Ph.D thesis, Johannes Guttenberg University Mainz, 2005. </mixed-citation>
</ref>
<ref id="ref2">
<label>2</label><mixed-citation publication-type="other" xlink:type="simple"> Clough, S. and Iacono, M.: Line-by-line calculation of atmospheric fluxes and cooling rates 2 Application to carbon dioxide, ozone, methane, nitrous oxide and the halocarbons, J. Geophys. Res., 100, 16519–16535, 1995. </mixed-citation>
</ref>
<ref id="ref3">
<label>3</label><mixed-citation publication-type="other" xlink:type="simple"> Damian, V., Sandu, A., Damian, M., Potra, F., and Carmichael, G.: The kinetic preprocessor KPP – a software environment for solving chemical kinetics, Comput. Chem. Eng., 26, 1567–1579, 2002. </mixed-citation>
</ref>
<ref id="ref4">
<label>4</label><mixed-citation publication-type="other" xlink:type="simple"> Fomichev, V I., Jonsson, A I., de~Grandpré, J., Beagley, S R., McLandress, C., Semeniuk, K., and Shepherd, T G.: Response of the middle atmosphere to CO&lt;sub&gt;2&lt;/sub&gt; doubling: results from the Canadian Middle Atmosphere Model, J. Climate, 20, 1121–1144, 2007. </mixed-citation>
</ref>
<ref id="ref5">
<label>5</label><mixed-citation publication-type="other" xlink:type="simple"> Fortuin, J. and Kelder, H.: An ozone climatology base on ozonesonde and satellite measurements, Clim. Dynam., 103, 31709–31734, 1998. </mixed-citation>
</ref>
<ref id="ref6">
<label>6</label><mixed-citation publication-type="other" xlink:type="simple"> Hoor, P., Borken-Kleefeld, J., Caro, D., Dessens, O., Endresen, O., Gauss, M., Grewe, V., Hauglustaine, D., Isaksen, I. S. A., Jöckel, P., Lelieveld, J., Myhre, G., Meijer, E., Olivie, D., Prather, M., Schnadt Poberaj, C., Shine, K. P., Staehelin, J., Tang, Q., van Aardenne, J., van Velthoven, P., and Sausen, R.: The impact of traffic emissions on atmospheric ozone and OH: results from QUANTIFY, Atmos. Chem. Phys., 9, 3113–3136, doi:10.5194/acp-9-3113-2009, 2009. </mixed-citation>
</ref>
<ref id="ref7">
<label>7</label><mixed-citation publication-type="other" xlink:type="simple"> Jöckel, P.: Technical note: Recursive rediscretisation of geo-scientific data in the Modular Earth Submodel System (MESSy), Atmos. Chem. Phys., 6, 3557–3562, doi:10.5194/acp-6-3557-2006, 2006. </mixed-citation>
</ref>
<ref id="ref8">
<label>8</label><mixed-citation publication-type="other" xlink:type="simple"> Jöckel, P., Tost, H., Pozzer, A., Brühl, C., Buchholz, J., Ganzeveld, L., Hoor, P., Kerkweg, A., Lawrence, M. G., Sander, R., Steil, B., Stiller, G., Tanarhte, M., Taraborrelli, D., van Aardenne, J., and Lelieveld, J.: The atmospheric chemistry general circulation model ECHAM5/MESSy1: consistent simulation of ozone from the surface to the mesosphere, Atmos. Chem. Phys., 6, 5067–5104, doi:10.5194/acp-6-5067-2006, 2006. </mixed-citation>
</ref>
<ref id="ref9">
<label>9</label><mixed-citation publication-type="other" xlink:type="simple"> Kerkweg, A., Sander, R., Tost, H., and Jöckel, P.: Technical note: Implementation of prescribed (OFFLEM), calculated (ONLEM), and pseudo-emissions (TNUDGE) of chemical species in the Modular Earth Submodel System (MESSy), Atmos. Chem. Phys., 6, 3603–3609, doi:10.5194/acp-6-3603-2006, 2006. </mixed-citation>
</ref>
<ref id="ref10">
<label>10</label><mixed-citation publication-type="other" xlink:type="simple"> Kirner, O., Ruhnke, R., Buchholz-Dietsch, J., Jöckel, P., Brühl, C., and Steil, B.: Simulation of polar stratospheric clouds in the chemistry-climate-model EMAC via the submodel PSC, Geosci. Model Dev. Discuss., 3, 2071–2108, doi:10.5194/gmdd-3-2071-2010, 2010. </mixed-citation>
</ref>
<ref id="ref11">
<label>11</label><mixed-citation publication-type="other" xlink:type="simple"> Roeckner, E., Brokopf, R., Esch, M., Giorgetta, M., Hagemann, S., Kornblueh, L., Manzini, E., Schlese, U., and Schulzweida, U.: Sensitivity of simulated climate to horizontal and vertical resolution in the ECHAM5 atmosphere model, J. Climate, 19, 3771–3791, 2006. </mixed-citation>
</ref>
<ref id="ref12">
<label>12</label><mixed-citation publication-type="other" xlink:type="simple"> Sander, R., Kerkweg, A., Jöckel, P., and Lelieveld, J.: Technical note: The new comprehensive atmospheric chemistry module MECCA, Atmos. Chem. Phys., 5, 445–450, doi:10.5194/acp-5-445-2005, 2005. </mixed-citation>
</ref>
<ref id="ref13">
<label>13</label><mixed-citation publication-type="other" xlink:type="simple"> Steil, B., Brühl, C., Manzini, E., Crutzen, P J., Lelieveld, J., Rasch, P J., Roeckner, E., and Krüger, K.: A new interactive chemistry-climate model: 1 Present-day climatology and interannual variability of the middle atmosphere using the model and 9 years of HALOE/UARS data, J. Geophys. Res., 108, D4290, \doi10.1029/2002JD002971, 2003. </mixed-citation>
</ref>
<ref id="ref14">
<label>14</label><mixed-citation publication-type="other" xlink:type="simple"> Unger, N., Shindell, D., Koch, D., and Streets, D.: Air pollution radiative forcing from specific emissions sectors at 2030, J. Geophys. Res., 113, D02306, \doi10.1029/2007JD008683, 2008. </mixed-citation>
</ref>
<ref id="ref15">
<label>15</label><mixed-citation publication-type="other" xlink:type="simple"> von Storch, H. and Zwiers, F.: Statistical analysis in climate research, Cambridge University Press, Cambridge, 1999. </mixed-citation>
</ref>
<ref id="ref16">
<label>16</label><mixed-citation publication-type="other" xlink:type="simple"> WMO: Scientific assessment of ozone depletion: 2006, vol 50, in: Global Ozone Res. Monit. Proj. Rep., World Meteorological Organization, Geneva, Switzerland, 2007. </mixed-citation>
</ref>
</ref-list>
</back>
</article>